Helmut Strey
I am an Associate Professor at the Biomedical Engineering Department at Stony Brook University. I also have affiliate positions at the Martinos Center for Biomedical Imaging at MGH/Harvard Medical School and at JuliaLab at MIT/CSAIL. I am currently leading the development of Neuroblox.jl, a Julia package to design, simulate, and analyze dynamic models of the brain. Our effort is built on top of ModelingToolkit.jl, but we are also developing our own, and sometimes more efficient, algorithms to build graphs of dynamical motives (we just released GraphDynamics.jl
Sessions
Computational neuroscience aims to simulate the brain in silico, from single synapses to brain-wide networks. In this workshop, you will learn the basics of computational neuroscience via hands-on model building in Neuroblox and Julia. You will simulate models from the literature, from single neurons to large circuits with synaptic plasticity, and fit them to neural data.
Neuroblox.jl is designed for computational neuroscience and psychiatry applications. Our tools range from control circuit system identification to brain circuit simulations bridging scales from spiking neurons to fMRI-derived circuits, parameter-fitting models to neuroimaging data, interactions between the brain and other physiological systems, experimental optimization, and scientific machine learning. In this talk we will give an update on the new features we added in the last two years.