2025-03-01 –, F-AVR
Bioinformatics is a field in data science that analyzes biological data with technology. Python is one of the key parts of bioinformatics since it is popular, has a wide library, and has a large community. This talk will also highlight the important role that bioinformatics plays in helping the country solve its challenges. Through the lens of bioinformatics tools like Biopython, scikit-bio, and more, the audience—whether they are developers, data scientists, researchers, or simply enthusiasts—will be able to gain insights and be inspired to harness these tools and participate in solving real-world problems.
The target audience of this talk is categorized into two (2): primary and secondary audiences.
a. Primary Audience: Python developers, data scientists, bioinformaticians, and health professionals interested in applying Python and bioinformatics in addressing real-world problems.
b. Secondary Audience: Students, researchers, and professionals in the Philippines, or anyone interested in the intersection of technology and biology (bioinformatics).
In this talk, I will cover the following topics:
-
Introduction: Bioinformatics in Action in the Philippines (13 minutes)
-> Bioinformatics as an application of data science will be introduced, along with some example applications in the Philippines. -
Tools and Techniques: How Python Powers Bioinformatics in the Philippines (7 minutes)
-> Introduction of Python's role in bioinformatics (BioPython, Pandas, NumPy, SciPy, scikit-bio, etc.). -
Short Walkthrough: What is an example of a bioinformatics process? (10 minutes)
-> Project walkthrough, which will showcase what a bioinformatics process looks like.
Note: For better understanding and appreciation of the talk, having an idea about bioinformatics can help but is not required.
Intermediate
Category:Data Science/Analysis/Engineering
- [Speaking Experience] Cloud Computing 101: Kickstart Your AWS Journey
- Resume for Reference
- [Github Project] Bioinformatics Bipolar Drug Discovery
- [Related Written Article] AWS in Bioinformatics: Biology, data, & the cloud
- [Related Written Article] SRA Toolkit + AWS: Revolutionizing Bioinformatics Data Prep
- LinkedIn Profile for Reference
- [Speaking Experience] SP Madrid OJT Presentation
She is a 4th-year Computer Science student in Pamantasan ng Lungsod ng Maynila (University of the City of Manila) and an IT intern in Tutorials Dojo. With her team, she has won the 2024 AWS Innovation Cup Hackathon. She is actively involved in campus organizations such as GDSC PLM and AWS Cloud Clubs Haribon, and she's passionate about the convergence of medicine and technology, particularly data science. Through her brand, "Beyond the Vinculum," Samantha is committed to pushing the boundaries and shaping the future of these ever-evolving fields.